Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAITKINDCFELLSMVTYADKLKSLIKKEFSISFEEFAVLTYISENKEKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDERTVLILVNAQQRKKIESLLSRVNKRITEANNEIEL
1HSJ Chain:A ((374-485))
---SKINDINDLVNATFQVKKFFRDTKKKFNLNYEEIYILNHILRSESNEISSKEIAKCSEFKPYYLTKALQKLKDLKLLSKKRSLQDERTVIVYVTDTQKANIQKLISELEEYI---------
General information:
TITO was launched using:
RESULT:
Template:
1HSJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42781 for 728 contacts (-58.8/contact) +
2D Compatibility (PS) -11722 + (NN) -4828 + (LL) 1284
1D Compatibility (HY) -6800 + (ID) 1700
Total energy: -66547.0 ( -91.41 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_1HSJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSJ-query.scw
PDB file :
Tito_Scwrl_1HSJ.pdb
: