Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNEIQILNNGYPMPSVGLGVYKISD-EDMTKVVNAAIDAGYRAFDTAYFYDNEASLGRALKDNGVDREDLFITTKLWNDYQGYEKTFEYFNKSIENLQTDYLDLFLIHWPCEADGLFLETYKAMEELYEQGKVKAIGVCNFNVHHLEKLMAQSSIKPMVNQIEVHPYFNQQELQEFCDRHDIKVTAWMPLMRNRGLLDNPVIVKIAEKYHKTPAQVVLRWHLAHNRIIIPKSQTPKRIQENIDILDFNLELTEVAEIDALDRNARQGKNPDDVKIGDLK
4FZI Chain:B ((18-283))
-------LHNSVRMPQLGLGVWRAQDGAETANAVRWAIEAGYRHIDTAYIYSNERGVGQGIRESGVPREEVWVTTKVWNSDQGYEKTLAAFERSRELLGLEYIDLYLIHWPGKKK--FVDTWKALEKLYEEKKVRAIGVSNFEPHHLTELFKSCKIRPMVNQVELHPLFQQRTLREFCKQHNIAITAWSPLGS---ILKNHVLGEIAKKHNKSPAQVVIRWDIQHGIVTIPKSTNKGRIQENFNVWDFKLTEEEMRQIDELNEDKRIGADPDN-------
General information:
TITO was launched using:
RESULT:
Template:
4FZI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143972 for 2222 contacts (-64.8/contact) +
2D Compatibility (PS) -28450 + (NN) -16068 + (LL) 1240
1D Compatibility (HY) -26400 + (ID) 6400
Total energy: -220050.0 ( -99.03 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_4FZI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FZI-query.scw
PDB file :
Tito_Scwrl_4FZI.pdb
: