Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVPETK
3QWD Chain:D ((3-192))--LIPTVIE------RAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGG--GQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAKEYGLIDEVMVP---


General information:
TITO was launched using:
RESULT:

Template: 3QWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125408 for 1420 contacts (-88.3/contact) +
2D Compatibility (PS) -20012 + (NN) -8881 + (LL) 668
1D Compatibility (HY) -25600 + (ID) 9100
Total energy: -188333.0 ( -132.63 by residue)
QMean score : 0.590

(partial model without unconserved sides chains):
PDB file : Tito_3QWD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QWD-query.scw
PDB file : Tito_Scwrl_3QWD.pdb: