Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAIVNKVIIVEGKSDKKRVQQVIAEPVNIICTHGTMSIDKLDDMIESLYDKQVFVLADSDDEGDRIRNWFKRYLSESEHIFIDKTYCQVANCPKQYLAHVLSKHGFTCKKETPLLPNINNERLVLVNE
2FCJ Chain:C ((3-112))
--RVEKVIIVEGRSDKQKVAAVLNEPVVIVCTNGTISDARLEELADELEGYDVYLLADADEAGEKLRRQFRRMFPEAEHLYIDRAYREVAAAPIWHLAQVLLRARFDVRIES----------------
General information:
TITO was launched using:
RESULT:
Template:
2FCJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73955 for 840 contacts (-88.0/contact) +
2D Compatibility (PS) -11778 + (NN) -2191 + (LL) 1352
1D Compatibility (HY) -10400 + (ID) 2400
Total energy: -99372.0 ( -118.30 by residue)
QMean score : 0.688
(partial model without unconserved sides chains):
PDB file :
Tito_2FCJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FCJ-query.scw
PDB file :
Tito_Scwrl_2FCJ.pdb
: