Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVVYGADVICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKDNDNLTDHDLQFIERIEQDELFYPLITMNDEYVADGYIQTKQITRFIDQKLVNE
1T1V Chain:A ((4-73))
LRVYSTS-VTGSREIKSQQSEVTRILDGK--------RIQYQLVDISQDNA----LRDEMRTLAGNPKATPPQIVNGNHYCGD-------------------
General information:
TITO was launched using:
RESULT:
Template:
1T1V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46543 for 457 contacts (-101.8/contact) +
2D Compatibility (PS) -7058 + (NN) 868 + (LL) 2416
1D Compatibility (HY) -800 + (ID) 650
Total energy: -51767.0 ( -113.28 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_1T1V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T1V-query.scw
PDB file :
Tito_Scwrl_1T1V.pdb
: