Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENF--VTHAKNGY-YDGITFHRVINDFMIQGGDPTA-TGMGGESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE
1XQ7 Chain:C ((20-165))
------------------------GRVVIGLFGNDVPKTVENFKQLASGENGFGYKGSIFHRVIRNFMIQGGDFTNFDGTGGKSIYGTRFDDE-NLKIKHFVGAVSMANAGPNSNGSQFFVTTAP----------------------------TPWLDGRHVVFGKVVEGMDVVKKVENTKTGLNDKPKKAVKINDCGV--
General information:
TITO was launched using:
RESULT:
Template:
1XQ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41196 for 1051 contacts (-39.2/contact) +
2D Compatibility (PS) -15029 + (NN) -7455 + (LL) 3028
1D Compatibility (HY) -11600 + (ID) 3700
Total energy: -75952.0 ( -72.27 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_1XQ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XQ7-query.scw
PDB file :
Tito_Scwrl_1XQ7.pdb
: