Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNKLIAKSLLTIAAIGITTTTIASTADASEGYGPREKKPVSINHNIVEYNDGTFKYQSRPKFNSTPKYIKFKHDYNILEFNDGTFEYGARPQFNKPAAKTDATIKKEQKLIQAQNLVREFEKTHTVSAHRKAQKAVNLVSFEYKVKKMVLQERIDNVLKQGLVR |
2HWN Chain:F ((3-21)) | --------------------------------------------------------------------------------------------------------------------------------------------ELAWKIAKMIVSDVMQQCK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HWN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45 for 66 contacts (-0.7/contact) +
2D Compatibility (PS) -2105 + (NN) -1575 + (LL) 9616
1D Compatibility (HY) -2800 + (ID) 150
Total energy: 2941.0 ( 44.56 by residue)
QMean score : 0.305
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