Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLNGKDKVHVQRVVDGDTFIANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKTLTN-QDVYLEYDK-EKQDRYGRTLAYVWISKDRMYNKELVEKGLAREKY-FSPNGKYRNVFIEAQNKAKQQKLNIWSK |
1STA Chain:A ((18-143)) | ----------------------------------------------------KAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYIY-ADGKMVNEALVRQGLAKVAYVYKPNNTHEQHLRKSEAQAKKEKLNIWS- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1STA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 4443 for 943 contacts (4.7/contact) +
2D Compatibility (PS) -13275 + (NN) -6140 + (LL) 4188
1D Compatibility (HY) -9200 + (ID) 2500
Total energy: -22484.0 ( -23.84 by residue)
QMean score : 0.498
|
|
|