Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQTLAQTKQISQSHTFDVSQSHHKTPDDTNSHSVIYSTQNLDLWYGENHALQNINLDIYENQITAIIGPSGCGKSTYIKTLNRMVELVPSVKTAGKILYRDQDIFDQKYSKEQLRTNVGMVFQQPNPFPK-SIYDNITYGPKIHGIKNKKVLDEIVEKS----LRGAAIWDELKDRLHTNAYSLSGGQQQRVCIARCLAIEPEVILMDEPTSALDPISTLRVEELVQELKE-KYTIIMVTHNMQQAARVSDKTAFFLNGYVNEYDDTDKIFSNPSNKKTEDYISGRFG |
| 4U02 Chain:B ((4-238)) | -----------------------------------IIRIRNLHKWFGPLHVLKGIHLEVAPGEKLVIIGPSGSGKSTLIRTINRLEDF-----QEGEVVVDGLSVKDDRALRE-IRREVGMVFQQFNLFPHMTVLENVTLAP----MRVRRWPREKAEKKALELLERVGILDQARK----YPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRDLAQGGMTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRPKEERTRSFL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108404 for 1899 contacts (-57.1/contact) +
2D Compatibility (PS) -25116 + (NN) -13965 + (LL) 2712
1D Compatibility (HY) -17600 + (ID) 4450
Total energy: -166823.0 ( -87.85 by residue)
QMean score : 0.420
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