Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLQTTYPSNNYPIFVEHGAIDHISTYIDQFDQSFILIDEH-VNQYFADKFDDILSYENVHKVII--PAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILAH-DSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFEQILSGYAEVYKHALLNGESTTQEIEQHFKDREILQSLN--GMDKYIAKGIETKLDIVVADEKEQGVRKFLNLGHTFGHAVE----YNHKIAHGHAVMIGIIYQFIVANI--LFNSNHDIQHYINYLTKLGYPLETITDIDFETIYQYMLSDKKNDKQGVQMVLIKHFG-DIVVQHIDQTTLQHACEQLKTYFK |
| 3OKF Chain:B ((40-389)) | ---------RSYPISIGAGLFANPALLSLSAKQKVVIVTNHTVAPLYAPAIISLLDHIGCQHALLELPDGEQYKTLETFNTVMSFLLEHNYSRDVVVIALGGGVIGDLVGFAAACYQRGVDFIQIPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPKAVVIDTDCLTTLPAREFAAGMAEVIKYGIIYDSAFFDWLEAQM---EALYALDEQALTYAIARCCQIKAEVVAQDEKESGIRALLNLGHTFGHAIEAHMGYGNWL-HGEAVSAGTVMAAKTAQLQGLIDASQ-FERILAILKKAHLPVRTPENMTFADFMQHMMR----------LVLPTSIGTSAVVKGVPEAVIAQAIEYCRT--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OKF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -274347 for 2754 contacts (-99.6/contact) +
2D Compatibility (PS) -34576 + (NN) -953 + (LL) 1260
1D Compatibility (HY) -29600 + (ID) 5850
Total energy: -344066.0 ( -124.93 by residue)
QMean score : 0.526
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