Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKATTIIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDITIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVVRPMHDQFIEPTKKYADIIIPEGGSNKVAIDIMTTKIQSLVSKQ
3ASZ Chain:B ((8-196))
-----VIGIAGGTASGKTTLAQALARTL-GERVALLPMDHYYKDLGHLPLEERLRVNYDHPDAFDLALYLEHAQALLRGLPVEMPVYDFRAYTRSPRRTPVRPAPVVILEGILVLYPKELRDLMDLKVFVDADADERFIRRLKRDVLERGRSLEGVVAQYLEQVKPMHLHFVEPTKRYADVIVPRGGQNPVALEM------------
General information:
TITO was launched using:
RESULT:
Template:
3ASZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62547 for 1484 contacts (-42.1/contact) +
2D Compatibility (PS) -20626 + (NN) -10919 + (LL) 1820
1D Compatibility (HY) -19600 + (ID) 5000
Total energy: -116872.0 ( -78.75 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_3ASZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ASZ-query.scw
PDB file :
Tito_Scwrl_3ASZ.pdb
: