Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVKVHICFVVKTASGYCYLNKREAQAAI
2OKR Chain:C ((1-24))
--IKIK---KIEDASNPLLLKRRKKARAL
General information:
TITO was launched using:
RESULT:
Template:
2OKR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 623 for 85 contacts (7.3/contact) +
2D Compatibility (PS) -2363 + (NN) 1877 + (LL) 804
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -1309.0 ( -15.40 by residue)
QMean score : 0.365
(partial model without unconserved sides chains):
PDB file :
Tito_2OKR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OKR-query.scw
PDB file :
Tito_Scwrl_2OKR.pdb
: