Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MQDNSTKYLLYIQTATSNHLETNCVFLHCDYILKVPINKLVSYYAKLHLSSQSVLIETAKNILNINKLVPIYINPKTILFPLKHKRAPIQIYINAHYIVGMTAIENSTLIHFQEGIQLEVDEPFSLVSKKCHESLALKHFIENTISN
1ASH Chain:A ((1-147))
ANKTRELCMKSLEHAKVDTSNEARQDGIDLYKHMFEN--YPPLRKYFKSREEYTAEDVQNDPFFAKQGQKILLACHVLCATYDDRETFNAYTRELLDRHAR-DHVHMPPEVWTDFWKLFEEYLGKKTTLDEPTKQAWHEIGREFAKEINK
General information:
TITO was launched using:
RESULT:
Template:
1ASH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62537 for 1018 contacts (-61.4/contact) +
2D Compatibility (PS) -14225 + (NN) 2764 + (LL) 244
1D Compatibility (HY) 4000 + (ID) 700
Total energy: -70454.0 ( -69.21 by residue)
QMean score : 0.126
(partial model without unconserved sides chains):
PDB file :
Tito_1ASH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ASH-query.scw
PDB file :
Tito_Scwrl_1ASH.pdb
: