Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITFENIQQLEKYTLMTMHGLFNQLKLGIISIDNAEHTLFTPYMMESLSSLGVKPDIIDLIHKGTELEDFAAFNLSIEDTVTVCLQRTEELLNQYKNVEFNDKILINWRIIQE
2OJM Chain:A ((1-22))
--------------------FFHHIFRGIVHVGKTIHRLVTG-----------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OJM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1245 for 86 contacts (-14.5/contact) +
2D Compatibility (PS) -2220 + (NN) 453 + (LL) 8072
1D Compatibility (HY) -2800 + (ID) 300
Total energy: 1960.0 ( 22.79 by residue)
QMean score : -0.223
(partial model without unconserved sides chains):
PDB file :
Tito_2OJM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OJM-query.scw
PDB file :
Tito_Scwrl_2OJM.pdb
: