Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQLYYLGPKGTFSYLACRQYFSENEATFQPKSNLFEVIKAVADDDTSIGVVPIENSIEGTINIVADALAQQDVFAHGEIRLDINFALYGNGTDSISDIKKVYSIAPAISQTTNYIHQHQFDYDYVDSTIQSLTKIENGVAAIAPLGSGEAYGFTPIDTHIEDYPHNVTRFLVIKNQQQFDQNATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQADSAITTDIKKVIAILETLDFKVEMIGAFN |
2FGC Chain:A ((38-92)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NKPGVMRKVANLFARRGFNISSITVGESET-PGLSRLVIMVKGDDK-TIEQIEKQAY------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2FGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -25292 for 271 contacts (-93.3/contact) +
2D Compatibility (PS) -5848 + (NN) -479 + (LL) 13920
1D Compatibility (HY) -800 + (ID) 700
Total energy: -19199.0 ( -70.85 by residue)
QMean score : 0.406
|
|
|