Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEDKNSVIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKDIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPHDEMHRRVSEALKQVDMLERADYEPNALSGGQKQRVAIASVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTATEI----FDHAEELTRIGLDLPFPIKINQMLGHQTSFLTYEGLVDQL |
4HLU Chain:C ((12-247)) | -------IELNSVSFRYNGD--YVLKDVNAEFETGKIYVVVGKNGSGKTTLLKILAGL-LAAAGEIFLDGSPA--DPF-LLRKNVGYVFQNPSSQIIGATVEEDVAFSLEIMGLDESEMRKRIKKVLELVGLSGLAAADPLNLSGGQKQRLAIASMLARDTRFLALDEPVSMLDPPSQREIFQVLESLKNEGK-GIILVTHELEYLDDMDFILHISNGTIDFCGSWEEFVEREFDDVE--------IPFKWKLWKKCG--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4HLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -124136 for 1856 contacts (-66.9/contact) +
2D Compatibility (PS) -25248 + (NN) -9686 + (LL) 2612
1D Compatibility (HY) -20800 + (ID) 4650
Total energy: -181908.0 ( -98.01 by residue)
QMean score : 0.425
|
|
|