Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDVTKDVIDILDHL
4TYQ Chain:B ((1-215))
MNIVLMGLPGAGKGTQAERIVAKYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVRERLSKSDCERGFLLDGFPRTVAQAEALEEILEEMGRKLEYVIHIEVRQEELMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVAKRLEVNMKQMAPLLAFYDSKEVLVNVNGQQDMEKVFKDLREILQGL
General information:
TITO was launched using:
RESULT:
Template:
4TYQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75681 for 1655 contacts (-45.7/contact) +
2D Compatibility (PS) -23228 + (NN) -12348 + (LL) 0
1D Compatibility (HY) -26400 + (ID) 7400
Total energy: -145057.0 ( -87.65 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_4TYQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TYQ-query.scw
PDB file :
Tito_Scwrl_4TYQ.pdb
: