Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILKFDHIIHYIDQLDRFS--F-PGDVIKLHSGGYHHK--------------YGTFNKLGYINENYIELLDVENNEKLKKMAKTIEGGVAFATQIVQEKYEQGFKNICLRTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDDEIKPPFFIQWEESDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEENDHYTDLILKNDDIYFRIEDGKVSKYHSVIIKDAQATSPYSIFIRGAIYRFEPLV |
| 3GM5 Chain:A ((17-157)) | -MRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEPDENPSTW------------REFLD--KNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGD-----FE----GGRYAYIDTL-RALKVMIELLE--------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35361 for 854 contacts (-41.4/contact) +
2D Compatibility (PS) -12818 + (NN) 1837 + (LL) 9816
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -39126.0 ( -45.81 by residue)
QMean score : 0.290
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