Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKKVYFNHDGGVDDLVSLFLLLQ-MENVQLIGVSTIGADCYLEPSLSASVKIINRFSNED----IQVAPSYERGKNPFPKEWRMHAFFMDALPILNEP--------VKHVASNVSDKEAFEDIIQTLKRQSEKVTLLFTGPLTDLAKALQK-DSSIVQYIEKLVWMGGTFLPKGNVEEPEHDGSAEWNAYWDPEAVKIVFDS-DIEIDMVALESTNQVPLTLDVRQRWANERQYTGIDFLGVSYAAVPPLTHFITNSTYFLWDVLTTAYIGNKDLVHSIEKKVDVISYGPSQGKTFECKDGRKINVINHVDNNAFFDYITALAKKVN |
| 3EPW Chain:B ((14-279)) | --KNVVLDHDGNLDDFVAMVLLASNTEKVRLIGALCTDADCFVENGFNVTGKIMCLMHNNMNLPLFPIGKSAATAVNPFPKEWRCLAKNMDDMPILNIPENVELWDKIKAENEKYEGQQLLADLVMN---SEEKVTICVTGPLSNVAWCIDKYGEKFTSKVEECVIMGGAVDVRGNVFLPSTDGTAEWNIYWDPASAKTVFGCPGLRRIMFSLDSTNTVPVRSPYVQRFGEQTNFLLSILVGTMWAMCTHCELLRDGDGYYAWDALTAAYV--------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EPW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -138842 for 2288 contacts (-60.7/contact) +
2D Compatibility (PS) -26457 + (NN) -10217 + (LL) 3552
1D Compatibility (HY) -21600 + (ID) 4550
Total energy: -198114.0 ( -86.59 by residue)
QMean score : 0.492
|
|
|