Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKSINHICFSVRNLNDSIHFYRDILLGKLLLTGKKTAYFELAGLWIALNEEKDIPRNEIHFSYTHIAFTIDDSEFKYWHQRLKDNNVNILEGRVRDIRDRQSIYFTDPDGHKLELHTGTLENRLNYYKEAKPHMTFYK
4NB0 Chain:B ((8-144))
-LKSINHICFSVRNLNDSIHFYRDILLGKLLLTGKKTAYFELAGLWIALNEEK---------SYTHIAFTIDDSEFKYWHQRLKDNNVNILEGRVRDIRDRQSIYFTDPDGHKLELHTGTLENRLNYYK-----MTFY-
General information:
TITO was launched using:
RESULT:
Template:
4NB0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64541 for 799 contacts (-80.8/contact) +
2D Compatibility (PS) -13131 + (NN) -2980 + (LL) 980
1D Compatibility (HY) -19200 + (ID) 6150
Total energy: -105022.0 ( -131.44 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_4NB0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NB0-query.scw
PDB file :
Tito_Scwrl_4NB0.pdb
: