Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLTDKIAVVTGAGSGIGEAIATLLHEEGAKVVLAGRNKDKLQNVANQLAQDSVKVVPTDVTNKEEVDELMKIAQQTFGGLDIVINSAGQMLSSKITDY-QVDEWDSMIDVNIKGTLYTAQAALPTMLEQSSGHLINIASISGFEVTKSSTIYSATKAAVHTITQGLEKELAKTGVKVTSISPGMV-DTAITAAYNPSDRKK----------LDPQDIAEAVLYALTQPKHVNVNEITVRPV
3ASV Chain:F ((2-236))
-------IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG-DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWVSTLPAHVNINTLEMMPV
General information:
TITO was launched using:
RESULT:
Template:
3ASV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118792 for 1843 contacts (-64.5/contact) +
2D Compatibility (PS) -24063 + (NN) -7190 + (LL) 788
1D Compatibility (HY) -17200 + (ID) 4100
Total energy: -170557.0 ( -92.54 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_3ASV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ASV-query.scw
PDB file :
Tito_Scwrl_3ASV.pdb
: