Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MSFYEFMQSFLG--DDTPLGELVDWINQDSNFPREVKSHSEILSYFRTNPCPESISVPVIKRALSVFNQFTNVQ--------
2FJ6 Chain:A ((1-82))
MKSFYHYLLKYRHPKPKDSISEFANQAYEDHSFPKTSTDYHEISSYLELN-ADYLHTMATFDEAWDQYESEVHGRLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2FJ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27397 for 439 contacts (-62.4/contact) +
2D Compatibility (PS) -7348 + (NN) -3994 + (LL) -140
1D Compatibility (HY) -800 + (ID) 650
Total energy: -40329.0 ( -91.87 by residue)
QMean score : 0.715
(partial model without unconserved sides chains):
PDB file :
Tito_2FJ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FJ6-query.scw
PDB file :
Tito_Scwrl_2FJ6.pdb
: