Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKIVLITGGNKGLGYASAEALKALGYKVYIGSRNDVRGQQ-----ASQKLGVHYVQLDVTSDYSVKNAYNMIAEKEGRLDILINNAGISGQFSAPSKLTPRDVEEVYQTNVFGIVRMMNTFVPLLEKSEQPVVVNVSS--GLGSFGMVTNPETAESKVNSLAYCSSKSAVTMLTLQYAKGLPN--MQINAADPGATNTDLV------GDFSNNSKHVSEGIKPIIQLATIGADGPTGTFINGDGEMPW |
| 4QED Chain:B ((1-215)) | MKKNVLITGGFKGIGKQVALEFLKNDYHVCITSRYFEKEKRIPHLFSSYEENISFYQLDVTDEEQVNEIINKIVKKFGRLDVLVNNAGISLSDGLLTETKTTDFNKMINTNILGTYFCMKYALKHMQKVSCGAIVNISSITGLSGFPY------------SILFGSTKHAVIGLTKGAAVEFADKGIKINAVAPGIIKTETLQKEIDSGEFSEDS---ISSIHPMQKLGT------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QED.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76656 for 1509 contacts (-50.8/contact) +
2D Compatibility (PS) -21666 + (NN) -7208 + (LL) 760
1D Compatibility (HY) -12800 + (ID) 3650
Total energy: -121220.0 ( -80.33 by residue)
QMean score : 0.508
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