Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKYKIDFSKGLVPAILQDNQTKQVLMLGYMNQEAFDKTIEDGVVCFYSRSKQRLWTKGETSGHTQLVKDIHVDCDNDTILIDVIPNGPTCHTGSQSCFNTEVPFSVQTLAQTVQDSAQSNNEKSYTKYLLTEGIEKITKKYGEEAFEVVIEAIKGDKKAFVSEVADELYHLFVLMHALGVDFSEIEAELARRHHKRNNFKGERQNIEQW
1ZPS Chain:A ((20-131))
--------GEDLIIAVAQDHETGEVLMVAYMNREALRRTLETGTAHYWSTSRGKLWLKGESSGHVQRVKDVLVDCDGDAVVLKVEQEGGACHTGYRSCFYRSIDGDE-LKVREDAVK-VFDP----------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZPS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29932 for 767 contacts (-39.0/contact) +
2D Compatibility (PS) -12618 + (NN) -7578 + (LL) 8668
1D Compatibility (HY) -6800 + (ID) 2200
Total energy: -50460.0 ( -65.79 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_1ZPS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZPS-query.scw
PDB file :
Tito_Scwrl_1ZPS.pdb
: