Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAFLGALEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNVIPPKTSYKESLSTIASVEYAIAHVGVQNLIICGHSDCGAC-GSIHLIHDETTKAKTPYIANWIQFLEPIKEELKNHPQFSNHFAKRSWLTERLNARLQLNNLLSYDFIQERVINNELKIFGWHYIIETGRIYNYNFESHFFEPIEETIKQRISHENF
1EKJ Chain:F ((20-212))
-----GFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYA-GTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTY--STDFIEEWVKIGLPAKAKVKAQ-HGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV-----------
General information:
TITO was launched using:
RESULT:
Template:
1EKJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100363 for 1442 contacts (-69.6/contact) +
2D Compatibility (PS) -20656 + (NN) -9467 + (LL) 1920
1D Compatibility (HY) -14400 + (ID) 3200
Total energy: -146166.0 ( -101.36 by residue)
QMean score : 0.454
(partial model without unconserved sides chains):
PDB file :
Tito_1EKJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EKJ-query.scw
PDB file :
Tito_Scwrl_1EKJ.pdb
: