Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKYSAIPTPCYALESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYEAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLAT-SIIFNSFHQYATYKDRILDKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKMSRLGITPSGFE--KGVK---EHGLEGVSGLHFHTHCEQN-ADALCRTLEHVERHFKPY----L----ENMAWVNFGGGHHITRS----DYDVNLLIQTIKDFKER------YHNTEVILEPGEAIGWQCGFLIASVIDIVQ-N-----DQEIAILDASFSAHMPDCLEMP-YRPSILKVSVENDEEIIEVEKGENQGAFSYFLGGPTCLAGDFMGS-FSFETPLKRGDKIVFQDMLHYTIVKNNSFNGVPLPSLAKIDSQGFKILKS-FSYEDYKNRN |
2O0T Chain:A ((37-446)) | ---AQEYGTPLFVIDEDDFRSRCRETAAAFG-SGANVHYAAKAFLCSEVARWISEEGLCLDVCTGGELAVALHA--SF-PPERITLHGNNKSVSELTAAVKAGVGHIVVDSMTEIERLDAIAGE--------AGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRVFATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLGGGLGISYLPSDDPPPIAELAAKLGTIVSDESTAVGLPTPKLVVEPGRAIAGPGTITLYEVGTVKDVDVSATAHRRYVSVDGGMSDNIRTALYGAQYDVRLVSRV-------------SDAPPVPARLVGKHCESGDIIVRDTWVPDDIRPGDLVAVAATGAYCYSLSSRYNMVGRPAVVAVHAGNARLVLRRETVDDLLSLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O0T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164920 for 3172 contacts (-52.0/contact) +
2D Compatibility (PS) -40004 + (NN) -8666 + (LL) 2112
1D Compatibility (HY) -10400 + (ID) 2700
Total energy: -224578.0 ( -70.80 by residue)
QMean score : 0.424
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