Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSLFHLKFLKPLSCLQAGLLYSLIFGVLYHFPLFAYVYKESNQVSFIAMIIIVLFCVNGALFLALGLISAYLMRWSAIVFSWLNSVAFYFISAYKVFLNKSMMGNVLNTNTHEVLGFLSVKLFVFIVVFGVLPGYVIYKIPLKNSSKKAPFLAILALVFIFIASAFMNAKNWLWFDKHAKFIGGLILPFAYSVNAFRVSALKFFAPTIKPLPLFSPNHSHSFVVLVIGESARKSNYALYGYEKPTTPRLSKRLENHELTLFNATSCATYTTASLECILDSSFKNSLGAYENLPTYLTKAGVKVFWYSANDGEK--------NVKVTSYLKNYELIQKCP---NCEAIAPYDESLLYNLPNLLKERSNENILLILHLAGSHGPNYDNKVPLNFRVFKPYCSSADLSSCSKESLINAYDNTIFYNDYLLDKIISMLENAKQPALMIYLSDHGESLGEGAYYLHGIPKSIAPKEQYEIPFILYANDLFKEKHSIIQTQTPINQNTIFHSVLGVFEDFKTPSAVYRPSLDLLKHKKE |
| 1O98 Chain:A ((312-498)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLDNTIGEVLSQHGLRQLRIAETEKYPHVTFFMSGGREEEFPGEDRILINSPKVPTYDLKPEMSAYEVTDALLKEIEA--DKYDAIILNYANPDMV-GH-S-----------------------GKLEPTIKAVEAVDECLGKVVDAILA--KGGIAIITADHGNADEVLTP--DGKP--QTAHTTNPVPVIVTKKGIK--------LRDGGILGDLAPTMLDLLGLPQPKEMTGKSLIV------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61339 for 1252 contacts (-49.0/contact) +
2D Compatibility (PS) -18498 + (NN) -4139 + (LL) 26720
1D Compatibility (HY) 400 + (ID) 1000
Total energy: -57856.0 ( -46.21 by residue)
QMean score : 0.351
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