Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNILFGISDTQECYNAIKFAVKLAHSLKEVRFTLLHVSMEVFIYSESGMMDYGQTE----ALEEEKAKALLKQFEDAFKKENIECESVLKSGDLIDVVLDMAK--DYDLLLIGASESNLLYR-LFISHQNSLVEQSSIPVVIAK
1MJH Chain:A ((6-158))
KKILYPTDFSETAEIALKHVKAFKTLK-AEEVILLHVIDEREIK-------VEEFENELKNKLTEEAKNKMENIKKELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSNKPVLVVK
General information:
TITO was launched using:
RESULT:
Template:
1MJH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96989 for 930 contacts (-104.3/contact) +
2D Compatibility (PS) -14087 + (NN) -5354 + (LL) 280
1D Compatibility (HY) -5200 + (ID) 1250
Total energy: -122600.0 ( -131.83 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_1MJH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MJH-query.scw
PDB file :
Tito_Scwrl_1MJH.pdb
: