Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMFHKALITFIVLWFFLNGLGAYDFKHCQAFFKKASLQKGGVALKELPKGVYLYYSKTYPKHAKVIKSDPFIGLYLLQSAPSEYVYTLRDLDKDALIRPMASIGANQATEARLLVGQKGYDRYAQISQKTQKNGVISNICYQMLGLGVGGNGFIETKFIKRFLNQQEPYYGDIGVRLEERHKRLVVAQFDPFFPK--NPFLKNDEILAINDYKIHSLAEFEWVVSNLSY--QSLAKVKIKRNHQIKEVTLKVNKRYGGFLLKDTFLERYGIALDERFIITKIGAHLPKGLDFLKLGDRILWVNHKSVSFNPKALREALS---TPKIELLVWRQGFEFYIKVR |
| 3WKM Chain:A ((10-158)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPVVVGYVQRDSIAQKIGIKPGDKIIKINGYEVRTWEDLRDALIRLSLDGVKETTLFLERNGEVLHLTIKVPNVQ--------KGEELGIAPLVKPVVGGVKKGSPADQVGIKPGDLILEVNGKKINTW-YELVEEVRKSQGKAIKLKILRNGKMIEKELI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -77656 for 929 contacts (-83.6/contact) +
2D Compatibility (PS) -14518 + (NN) 1706 + (LL) 12680
1D Compatibility (HY) -6800 + (ID) 1650
Total energy: -86238.0 ( -92.83 by residue)
QMean score : 0.451
|
|
|