Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDSVTLACGNGGKETNALIERVFMPYLKEW-IVAFDEDA-PKFEASGEYCVSTDSFVITPLIFNGGDIGKLCVCGSANDVSVQGGEPLYLNMGFILEEGLEIPLLKQILQSIQKELFKANLKLLSLDTKVVPKGSVDKLFINTTCIGKIIK-PGISSRHLQQGQAIILSDTIANHGASLFATRHEIKLKTNLQSDCQLLYPLLKPLFLSDLKIDALRDATRGGLASVLNEWANSSRVKIVIEEEKIPLKEETKGICEILGLEPYALANEGVFVLALNQKDAPKALEILKSNEKAKNACVIGGVFENPY-------PSVVLKNAWGFERILEMPEGELLPRIC |
| 2Z1U Chain:A ((7-343)) | --TLLLDYGSGGRASHRLISDLFLRHFDNPILGTLNDAARLDLT--GPLAMSTDSYTVDPIFFPGGDIGTLAVHGTVNDVSMLGARPRYLSCGFILEEGLDMDILERVVASMGKAAREAGVFIVTGDTKVVPRGACDKMFINTTGIGEILVDPAPSGDRARPGDAILISGSMGDHGLTILSQRQGLNFAADVCSDSASLNRVVEKLVLEVGDIHVLRDPTRGGLATTLNEIAGQSQAVCHVLETAVPVRESVRNGCSFLGLDPLYLANEGKLICILPEERAEAALAVLREGPHGEHAARIGSVK-SVGELGAARAGQVVMETALGGHRLLSML--EQLPRIC |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z1U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253256 for 2896 contacts (-87.5/contact) +
2D Compatibility (PS) -34259 + (NN) -6229 + (LL) 284
1D Compatibility (HY) -27600 + (ID) 6200
Total energy: -327260.0 ( -113.00 by residue)
QMean score : 0.475
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