Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRMLAEFEKIQAILMAFPHEFGDWAYCIEEARESFLHIIQTIAKHAKVLVCVHTNDTIGYETL-KNLPGVEIARIDTNDTWARDFGAISVENHGVLECLDFGFNGWGLKYPSNLDNQVNFKLKHLGFLK-----HP-LKTMPYILEGGSIESDGAGSILTNTQCLLEKNRNPHLNQNGIETMLKKELGAKQVLWYSYGYLKGDDTDSHTDTLARFLNKDTIVYSACEDENDEHYTALKKMQEELKTFKKLDGTPYKLIPLEIPKAVYNENQQRLPATYVNFLLCNNALIVPTYNDPNDTLILETLRQHTP-LEVIGVDCNTLIKQHGSLHCVTMQLY |
| 1ZBR Chain:A ((3-336)) | KRLFLPEWAPQEAVQLTWPHDRTDWAYMLDEVETCFVRIATAILRHERLIVVCPDRKRVFGLLPPELHHRLYCFELPSNDTWARDHGGISLLADGRPMIADFAFNGWGMKFAAHHDNLITRRLHA---LGLFAEGVTLDNRLAFVLEGGALETDGEGTLLTTDSCLFEPNRNAGLSRTAIIDTLKESLGVSRVLSLRHGALAGDDTDGHIDTLARFVDTRTIVYVRSEDPSDEHYSDLTAMEQELKELRRPDGQPYRLVPLPMAEALYD-GADRLPATYANFLIINGAVLVPTYDSHLDAVALSVMQGLFPDREVIGIDCRPLVKQHGSLHCVTMQYP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 39734 for 2710 contacts (14.7/contact) +
2D Compatibility (PS) -32295 + (NN) 6935 + (LL) 240
1D Compatibility (HY) 10800 + (ID) 1550
Total energy: 23864.0 ( 8.81 by residue)
QMean score : 0.040
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