Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQNLLIQAENAIALLFLLNDKNLKGKIDLIYIDPPFATNNHFTITNGRATTISNSKNGDIAYSDKVVGMDFMEFLKQRLVLLKELLSEQGSIYVHTDYKIGHYVKVMLDEIFGIQNFRNEITRIKCNPKNFKRIGYGNIKDMILFYSKGKNPIFNEPKIPYTPQDLEKRFPKIDKDKRRYTTVPI-HAPGEVESGECSKAFKGMLPPKGRHWRTDIATLERWDKEGLIEYSNNNNPRKKIYALEQVGKRVQDIWEFKDPQYPSYPTEKNAQLLDLIIKTSSNKDSIVLDCFCGSGTTLKSAFLLQRKFIGIDNSDLAIQACKNKLETITKDLFVSQNFYDFLVF |
1G60 Chain:A ((4-256)) | -INKIHQMNCFDFLDQV-----ENKSVQLAVIDPPYNLSKADWDS-------------------FDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTPFNCAFICQYLVS-KGM-IFQNWITWDKRDGMGSAKRRFSTGQETILFFSKSKNHTFNYDEVRV-----------------PYESTDRIKHASE--KG--------ILK-NGKRW-----------------------------FPNPNGRLCGEVWHFS--------TPKPRDLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQANFVLNQ----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G60.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107696 for 1731 contacts (-62.2/contact) +
2D Compatibility (PS) -25335 + (NN) -16791 + (LL) 4888
1D Compatibility (HY) -7600 + (ID) 3250
Total energy: -155784.0 ( -90.00 by residue)
QMean score : 0.410
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