Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYWTKLSIEYANQRSYLDDLFQVYPTIPEGLREIDSKIWSNVEYHFKRK-----DNLALITELLNLDLFPIKDSYMAYLKRDKS--------ALERNP--RTINRICGRLYEMGLNKIFEKCSEPKETNRQIGPMFKDWINNKSLGVEPVDLNDFIANENDAILKASDNVMAEFAKSHLNYHHHKGLDFVARFNKKYIIGEAKFLTDFGGHQNAQFNDAINTIETPNIKAIKVAILDGVLYIESNNKMRKLLDTTYRNYHIMSALVLREFLYQI |
1WMG Chain:A ((8-97)) | ------------------------------YAFKIPLSIRQKICSSLDAPNSRGNDWRLLA-QKLSMD-----R-YLNYFATKASPTGVILDLWEARQQDDGDLNSLASALEEMGKSEMLVAMATDG---------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WMG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36055 for 449 contacts (-80.3/contact) +
2D Compatibility (PS) -8062 + (NN) -5188 + (LL) 12960
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -40295.0 ( -89.74 by residue)
QMean score : 0.562
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