Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGHVVLSTPIV-TMFVVYSLLMLYIGF-----YFYKQNETTEDYFLGDRSMGPVISALSAGASDMSG-WLLMGLPGAL--YVGGLIN-SHIAIGLSL-----GALINWVF-----VAKRLR-------IYTSVI-ANSITISDYFETRFSDDKHILRLISAFVILIFFIFYISSGLVSGAKLFEATFGIQ-YTYALSIGTLIIVSYTFLGGYKAV-C-WTDLIQGLLMMSALIVVPIVMIIHLGGIGEGIKIIREIKPENLSFLQGSSVVAIISSLAWGLGYFGQPHILVRFMSIRSIRDVPKATTIG-ISWMVISLIGACVMGLLGVAYVHKFDLSLED-PEKIFIVMSQLLFNPWITGILLSAILAAVMSTASSQLLVSSSTIAEDFYATIFNKNAPQKLVMTISRLSVLGVACIAFFISTDKNASILSIVS-YAWAG-FGASFGSVILFSLF-----WSRMTRIGAIAGMLSGASTV-ILYDKFGKSFLDIYEIVPGFIVASVAIVAFSLF-SSVRSGTKEAFETMLKEIESLKH |
| 4QT9 Chain:A ((19-432)) | -----LSDDALMDTVQRRTFLYFWEGAEPNSGLAPERYHVDGVYPQNDAN------VVTSGGSGFGIMAILAGIDRGYVTREEGLARMERIVSFLEKADRFHGAYPHWWYGDTGKVKPFGQKDNGGDLVETAFLMQGLLAVHQYYANGNDKEKAIAQRIDRLWREVDWDWYRKGGQNVLYWHWSPTYGWEMDFP--------------IHGYNECMIMY-------ILAAASPTHGVPAAVYHDGWAQNGAIVSPHKVEG---------------IELHLRYQG--------------------TEAGPLFWAQYSFLGLDPVGLKD-EYCPSY---FHEMRNLTLVNRAYCIRNPKHYKGFGPDCWGLTASYSVDGYAAHSPNEQDDK-----------------------GVISPTAALSSIVYTPEYSLQVMRHLYNMGDKVFGPFGFYDAFSETDNWYPQRYLAIDQGPIA----VMIENYRTG--------------------LLWKLFMS------HPDVQAGLTKLGFNTN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -402405 for 3184 contacts (-126.4/contact) +
2D Compatibility (PS) -36832 + (NN) 11784 + (LL) 10056
1D Compatibility (HY) -6000 + (ID) 3300
Total energy: -426697.0 ( -134.01 by residue)
QMean score : 0.171
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