Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVQMDTEEVREFVGHLERFKELLNEEVNSLNGHFHNL-ESWQDARRDKFSEVLDNLKGTFNEFNEAAQEQIAWLKERIRVLEEDY
2VS0 Chain:A ((3-82))
--MIKMSPEEIRAKSQSYGQGSDQIRQILSDLTRAQGEIAANWEGQAFSRFEEQFQQLSPKVEKFAQLLEEIKQQLNSTADAVQE--
General information:
TITO was launched using:
RESULT:
Template:
2VS0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11238 for 436 contacts (-25.8/contact) +
2D Compatibility (PS) -8245 + (NN) -3975 + (LL) 460
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -25598.0 ( -58.71 by residue)
QMean score : 0.374
(partial model without unconserved sides chains):
PDB file :
Tito_2VS0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VS0-query.scw
PDB file :
Tito_Scwrl_2VS0.pdb
: