Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIFGTDGVRGKAGVKLTPMFVMRLGIAAGLYFKKHSQTNK-ILIGKDTRKSGYMVENALVSALTSIGYNVIQIGPMPTPAIAFLTEDMRCDAGIMISASHNPFEDNGIKFFNSYGYKLKEEEERAIEEIFHDEELLHSS-YKVGESVGSAKRIDDVIGRYIAHLKHSFP-KHLNLQKLRIVLDTANGAAYKVAPVVFSELGADVLVINDEPNG--CNINEQCGALHPNQLSQEVKKYRADLGFAFDGDADRLVVVDNLGNIVHGDKLLGVL--GVYQKSKNALSSQAVVATSMSNLALKEYLKSQDLELKHCAIGDKFVSECMRLNKANFGGEQSGHIIFSDYAKTGDGLVCALQVSALVLESKLVSSIALNPFELYPQSLVNLNIQ--------KKPPLESLKGYSALLKELDQLEIRH---LIRYSGTENKLRILLEAKDEKLLESKMQELKEFFEGQLC |
1WQA Chain:C ((3-434)) | -KLFGTFGVRGIANEKITPEFAMKIGMAFGTLLKREGRKKPLVVVGRDTRVSGEMLKEALISGLLSVGCDVIDVGIAPTPAVQWATKHFNADGGAVITASHNPPEYNGIKLLEPNGMGLKKEREAIVEELFFKEDFDRAKWYEIGEV-----RREDIIKPYIEAIKSKVDVEAIKKRKPFVVVDTSNGAGSLTLPYLLRELGCKVITVNAQPDGYFPARNPEPNEENLKEFMEIVKALGADFGVAQDGDADRAVFIDENGRFIQGDKTFALVADAVLKEKGGGL---LVTTVATSNL-LDDIAKKHGAKVMRTKVGDLIVARALYENNGTIGGEENGGVIFPEHVLGRDGAMTVAKVVEIFAKSGKKFSELIDELPKYYQIKTKRHVEGDRHAIVNKVAEMARERGYTVDTTDGAKIIFEDGWVLVRASGTEPIIRIFSEAKSKEKAQEYLNLGIELLEKALS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1WQA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -192862 for 3771 contacts (-51.1/contact) +
2D Compatibility (PS) -43952 + (NN) -15839 + (LL) 616
1D Compatibility (HY) -20400 + (ID) 7150
Total energy: -279587.0 ( -74.14 by residue)
QMean score : 0.406
|
|
|