Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQYALLFPGQGSQCIGMGKSFYESHTLAKELFERASNVLKVDMKKTLFE-ENELLKESAYTQPAIYLVSYIAYQLLNKQANGGLKPVFALGHSLGEVSAVSLSGALDFEKALKLTHQRGKMMQEACANKDASMMVVLGVSEESLLSLCQR---TKNVWCANFNGGMQVVLAGVKDDLKALEPTLKEMGAKRVVFLEMSVASHCPFLEPMIFKFQELLEKSLKDKFHFEIISNATNEAYHNKSKAVELLSLQLTQPVRYQDCVKS-NNDRVDVFFELGCGSVLKGLNKRLSNK-PTISVGDNKGLDEAIEFLEEYV |
| 3PTW Chain:A ((2-309)) | AKLGFLFAGQGAQYVGMGKEFFDNFEESKEVFKRSSEALGIDMEELCFNDPEGLLNKTEFTQPAIITTNMAILTALDKL---GVKSHISCGLSLGEYSALIHSGAINFEDGVKLVKKRGKFMQEAVAEGIGGMVAVLRMTPEQVDEIIEKSSPYGIVEGANYNSPGQIVISGELVALEKAMEFIKEVGG-RAIKLPVSAPFHCSMLQPAAEKLEDELNKISINKLNGIVMSNVKGEAYLEDDNIIELLTSQVKKPVLFINDIEKMIESGVDTFIEIGPGKALSGFVKKINKNVTVLNVEDLKSLEKTLSKLREME |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PTW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187307 for 2728 contacts (-68.7/contact) +
2D Compatibility (PS) -32806 + (NN) -12577 + (LL) -44
1D Compatibility (HY) -21200 + (ID) 5200
Total energy: -259134.0 ( -94.99 by residue)
QMean score : 0.599
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