Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPFVPTRSLKERKIDFIEAVLNPNAPKGGLYTLEHFETLEWQDCLGMSYSELVEHVFELLNLEIPKNLLASALKR-YENFDNPKNPAPIFALNE--------RLFVQELYHGPSLAFKDMALQPLASLFSNLAVGKNEKYLVLVSTSGDTGPATLEGLAGMPNVFVVCLYPKDGTSL--VQKLQMVTQNASNLKVFGVS-GDFDDA-QNALKNLLKDDDFNEALKARQLKLSV---ANSVNFGRIAFQIVYHIWGFLELYKKGAINSKEKITLAIPSGNFGNALGAFYAKK-MGLNIAKIKVVTNSNDVLREFIETGRYDLTKRSLKQTFSPAMDILKSSNVERALFSLFGFERTLELMQALEEEKFYALKPKELALLQE-HFSCASCSDEDCLKTIQEVYAEHQYLIDPHTATALNASLKTH------EKTLVSATASYEKFPKTTLLALNEQKKNDDDKAALETLKNSYNTPDSQRLDDLFERGIKHQEVLKLNEIKSSILLWLENTH |
| 1X1Q Chain:A ((28-416)) | ---------------------GRFGPYGGRYVPETLIPA---------L----EELEAAYREAKKDPAFLEELDHYLRQFA-G-RPTPLYHAKRLSEYWGGAQVFLKREDLLHTGAHKINNTLGQ---ALLARRMG-KRRVIAETGAGQHGVSVATVAA-LFGLECVVYMGEEDVRRQALNVFRMKLL-GAEVRPVAAGSRTLKDATNEAIRDWITNVR-TTF-----YILGSVVGPHPYPMMVRDFQSVIGEEVKRQSLELFG---RLPDALIAAVGGGSNAIGLFAPFAYLPEGRPKLIGVEAAGEGLST---------------GRHAASIGAGKRGVLHGSYMYLLYD------------YPGV--GPEHSYYADAGVAEYASVTDEEALEGFKLLARLEGIIPALESAHAIAYAAKVVPEMDKDQVVVINLSGRGDKDVTEVMRLLGG--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1X1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80931 for 3191 contacts (-25.4/contact) +
2D Compatibility (PS) -37527 + (NN) -13825 + (LL) 10204
1D Compatibility (HY) -2800 + (ID) 2350
Total energy: -127229.0 ( -39.87 by residue)
QMean score : 0.255
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