Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLNMNTHTRGIDSGLIHSLQSISLSMFR-KGFFGLYQGSISARIGA----N----QFVINKRNAVFDQLNENTLLVLHDKID----------------------Y--RWKEASLDSPIHASVYREFLDAKFIAYARPPYSLAYSLRHNRLLPRDYLGYRSLGEEIAIFNPKDYDSWQERADTEILRQLQESKKYFVFIKGCGIFAYHRELSKLMEVFDLIENSCKVLRLGDLMDYCYNDDPRLSV |
| 3M4R Chain:A ((4-216)) | MQNRWAET--KFDSDIDEVVYGSRLIGSDPDLVL-GGGNTSVKTTERDHAGRIISVLRVKNSGSNLGTIDSRGFTGIRMDDALAAAKIDKMTDEAMVDYLKKSMVNPSEPSPSVETFLHAFL-----PYKFVMHSHADAILSITNT--DLPS--DQIAKILG-NVVVLPYIPPGF---TLAKEVMNCFKK-GIDGIVLRKHGLLTFGDTGKEAYDRHINIVSRAENFIR---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M4R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130368 for 1492 contacts (-87.4/contact) +
2D Compatibility (PS) -18593 + (NN) -3042 + (LL) 1520
1D Compatibility (HY) -800 + (ID) 950
Total energy: -152233.0 ( -102.03 by residue)
QMean score : 0.476
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