Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVKTGVVRRRRHKKVLKLARGFYSGRRKHFRKAKEQLERSMYYAFRDRKQKKREFRSLWVVRINAACRMHNTSYSRFMHALKVANIELDRKVLADMAMNDMQAFKSVLESVKEHL
2GHJ Chain:B ((27-115))
---------------------------SRSYRRAKEAVMRALYYQYRDRKLRKREFRRLWIARINAAVRAYGLNYSTFINGLKKAGIELDRKILADMAVRDPQAFEQVVNKVKEAL
General information:
TITO was launched using:
RESULT:
Template:
2GHJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38946 for 504 contacts (-77.3/contact) +
2D Compatibility (PS) -9740 + (NN) -5899 + (LL) 2204
1D Compatibility (HY) -9200 + (ID) 2500
Total energy: -64081.0 ( -127.14 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_2GHJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GHJ-query.scw
PDB file :
Tito_Scwrl_2GHJ.pdb
: