Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MAQEKAVIR-DPKKLNAFDLRWIASLFGTAV--GAGILF-LPIRAGGHGIW--AIVVMSAIIFPLTYLGHRALAYFIGSKDKEDITMV--VRSHFGAQWGFLITLLYFLAIYPICLAYGVGITNVFDHFFTNQLHLAPFHRGLLAVALVSLMMLV---MVFNATIVTRICNALVYPLCLILLLFSLYL--IPYWQGANL-----FVVPSFKEFVLAIWLTLPVLVFSFNHSPIISTFTQNVGKEYGAFKEYKLNQIELGTSLMLLGFVMFFVFSCVMCLNADDFVKAREQNIPILSYFANTLNNPLINYAGPVVAFLAIFSSFFGHYYGAKEGL--EGIIIQSL-----KLKQASKTLSVGVTIFLWLTITLVAYINPNILDFIENLGGP-------------IIALILFVMPMIAFYSVSS--LKRFRNFKV-DIFVFVFGSL--------TALSVFLGLF----------- |
| 4HU8 Chain:A ((3-452)) | NEITLTIGQQKDLASMVPAKFAGQELSWTSSDPETASVTDKGIVTALKFSSGGANLFLKAPATGEAIITVTAGKQSHSVKVITTVKGKEDIEKLPPLKDHFKD----------YFLIGNIFNNRDVSGSMMDNDWLAHHYAILTPENHMKPSNLTNNRNETTGEITYTFSTADRMVNAAIAEGLKIHGHTLLWHQQIPPWQRSMESAAKDAALSVMKKYITEVMTHYKGKIYSWDVLNEI--FPDGRGDNWTTAMRPE--------NPWFKSIGSDFVYEAYLAARQAD---------PNAILYYNDYNMDQAGKAALIAAMVRDVNAKYKQAYPRETRLLIEGIGMQSHHNMDVPASNIRNTINRYRELGVKISVSELDILCMGWSAFRGSTGQGADKDDMTIATNRNILDQAYKFNEYMKLYLENSDIIERVSMWGVSDRYSWRSGGLPLLFDADNKAKPAYYSFVRAREDYEAAKA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4HU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -439411 for 3050 contacts (-144.1/contact) +
2D Compatibility (PS) -39144 + (NN) 1828 + (LL) 2696
1D Compatibility (HY) -4800 + (ID) 3500
Total energy: -482331.0 ( -158.14 by residue)
QMean score : 0.075
|
|
|