Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQENVPLSYDYSISKLFLYAMIAFGIIGMLIGIVLAFEL--SFPSLNYIAGEYGVFGRLRPLHTNAVIYGFTLGGIWASWYYIGQRVLKITYHQHPFLKIVGLLHFWLWILLLVLGVISLFAGLTQS---KEYAELMW-------PLDIIVV------VAWVLWGVNMFGSMSVRRENTI-----YVSLWYYIATYVGIAVMYIFNNLSIPTYFVA------DMGSVWHSISMYSGSNDALIQ---WWWGHNAVAFVFTSGVIGTIYYFLPKESGQPIFSYKLTLFSFWSLMFVYIWAGGHHLIYSTVPDWVQTLSSVFSVVLILPSWGTAINMLLTMRGQWHQLKESPLIKFLVLASTFYMLSTLEGSIQAIKSVNALAHFTDWIIGHVHDGVLGWVGFTLIASMYHMTPRLFKREIYSGRLVDFQFWIMTLGIVLYFSSMWIAGITQGMMWRDVDQYGNLTYQFIDTVKALIPYYNIRGVGGLMYFIGFIIFAYNIFMTITAGK---KLEREPNYATPMAR |
| 1FFT Chain:A ((52-540)) | -------VDHKRLGIMYIIVAIVMLLRGFADAIMMRSQQALASAGEAGF-LPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVVPLQIGA---RDVAFPFLNNLSFWFTVVGVILVNVSLGVGEFAQTGWLAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLI-------IASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEV-YILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQG--RIVFHSAMLWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGF-KLNETWGKRAFWFWIIGFFVAFMPLYALGF-MGMTRRLSQQIDP----------QFHTMLMIAASGAVLIALGILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEW |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1FFT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -403090 for 3778 contacts (-106.7/contact) +
2D Compatibility (PS) -44703 + (NN) 7511 + (LL) 3312
1D Compatibility (HY) -32000 + (ID) 3850
Total energy: -472820.0 ( -125.15 by residue)
QMean score : 0.271
|
|
|