Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSRDIVQYSKIRTELYAYLTYLFSHNIRNHLPEITLDYLNRQISKMQAEIKMAKSFFVLDAKGMLMLKPSQFKEQGHKEGLLEHDLTEGIELESHVSFSDKYYFYQAVNE--KRCILTDPYPSKKG------NHLVVSASYPVYDQNNDLAFVVCLQIPLRVAIEISSPSKYFKTFSEGSMVMYFMISIMLTLVSLLLFVKCISSFWTAIVHFSSFDIKEVFHPIVLLTLALATFDLVKAIFEEEVLGKNSGDNHHAIHRTMIRFLGSIIIALAIEALMLVFKFSVSEPDKITYAVYLAIGVAVLLISLAIYVKFAYSVLPKRER |
3LID Chain:A ((63-183)) | -------------------------------------TILENMWSSVARNQKLYKQIRFLDTSGTEKVRIKYDFKTSIA-----------GPSLILRDKSAREYFKYAQSLDNEQISAWGIELERDKGELVYPLSPSLRILMPISV-NDVRQGYLVLNVDIEYLSSLLNYSPVRDFHIELVKHKGFYIASPDESRLYGDIIPERSQFNFSNMYPDIWPRVVSEQAGYSYSGEHLIAFSSIKFVSNEPLHLIIDLSNEQLSKRATRDINDLIQE----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LID.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42174 for 784 contacts (-53.8/contact) +
2D Compatibility (PS) -12314 + (NN) 2745 + (LL) 9480
1D Compatibility (HY) -400 + (ID) 700
Total energy: -43363.0 ( -55.31 by residue)
QMean score : 0.206
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