Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKSWTKKWFLILFLMASCFGHLVATTGEKYFKMANQALKRGDYHRAVAFYKRSCN--LRMGVGCTSLGSMYEYGDGVDQNISKAVFYYRRGCNL--RNHLACASLGSMYEDGDGVQKDFPKAIYYYRRGCHLK--GGVSCGSLGFMYFNGTGVKQNYAKALSFSKYACSLN--YGISCNFVGYMYKSA------------------------------KGVEKDLKKALANFKRGCHL--KDGASCVSLGYLYEAGMDVKQNEEQALNLYKKGCSLK--EGSGCHNVAVMYYTGKGAPKDLEKATSYYKKGCALG--FSGSCKVLEVIGKESDNLQDDAQNDTQDSVQ |
| 1W3B Chain:A ((69-354)) | -----------------------------AYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVA----AGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKA----LGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNA----QGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKE----KGSVAEAEDCYNTALRLCPTHADSLNNLANIKRE----QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W3B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91871 for 1885 contacts (-48.7/contact) +
2D Compatibility (PS) -24065 + (NN) -3148 + (LL) 2328
1D Compatibility (HY) -13200 + (ID) 2000
Total energy: -131956.0 ( -70.00 by residue)
QMean score : 0.229
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