Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQRTLSIIKPDALKKKVVGKIIDRFESNGLEVVAMKRLHLSVKDAENFYAIHRERPFFKDLIEFMVSGPVVVMVLEGKDAVAKNRELMGATDPKLAQKGTIRADFAESIDANAVHGSDSLENAHNEIAFFFAAREF
4DUT Chain:A ((8-137))
--ERTLSIIKPDAVAKNVIGQIYSRFENAGLKIVAARMAHLSRADAEKFYAVHAERPFFKDLVEFMISGPVMIQVLEGEDAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSDAPETARVEIAFFFPEMNV
General information:
TITO was launched using:
RESULT:
Template:
4DUT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55638 for 1006 contacts (-55.3/contact) +
2D Compatibility (PS) -13714 + (NN) -1292 + (LL) 272
1D Compatibility (HY) -13200 + (ID) 4600
Total energy: -88172.0 ( -87.65 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_4DUT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DUT-query.scw
PDB file :
Tito_Scwrl_4DUT.pdb
: