Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIWLLVWGLYSLAFLHAIETIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHY---SVLKGLVEVVPVLNKPSMLRNHRGL--YGDMNRKFAALDKNDPEYPTIQEI---KSLIAKPSVDAVLHLHDGGGYYRPVYIDAMLNPKRWGNCFIIDQDEVKGAKFPNLLAFANNTIENINAHLLHPIEKYHLKNTRTAQGDTEMQKALTFYAINQ-KKSAFANEASKELPLESRVFYHLQAIEGLLNQLNIPFKRDFELNPNSVHALINDKSLWAKISSLPKMPLFNLRPKLNHFPLPSNTKIPQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDHSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNESKPNETGYTIKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKFV |
| 3B2Y Chain:A ((65-271)) | ----------------------------------DLPSLLISSGFHGEEAAGPWGMLHFLRGLQPALFERVNLSLLPLVNPTGFKAGHRFNRFGENPNRGFTL-----HTSLEGKLLLEHAQLLCAASRDGILTCHEDVLMNET-YVYSFEPTQTPG-R-F-S-------L--GLRDALGQYF-KLAK------FIDECPVTDG-VIFNHFDTSFEAFLVRSGAKLAACSETPGQEDFDRRVQANSAAMGQFIAHCAPI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53148 for 1609 contacts (-33.0/contact) +
2D Compatibility (PS) -19494 + (NN) -4683 + (LL) 17352
1D Compatibility (HY) -5600 + (ID) 1550
Total energy: -67123.0 ( -41.72 by residue)
QMean score : 0.327
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