Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVTFQVPSITCNHCVDKIEKFVGEIEGVSFIDASVEKKSVVVEFDTPATQD-LIKEALLDAGQEVV
2QIF Chain:A ((3-68))
-QKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDVA
General information:
TITO was launched using:
RESULT:
Template:
2QIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57252 for 453 contacts (-126.4/contact) +
2D Compatibility (PS) -6982 + (NN) -2805 + (LL) 208
1D Compatibility (HY) -4400 + (ID) 1200
Total energy: -72431.0 ( -159.89 by residue)
QMean score : 0.762
(partial model without unconserved sides chains):
PDB file :
Tito_2QIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QIF-query.scw
PDB file :
Tito_Scwrl_2QIF.pdb
: