Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAHKERLESNLLELLQE---ALASLNDSELNSLSVTK------VEC-SKGKHHALVFVLSSDHKILSKLKKAEGLIRQFVLQASG----WFKCPKLS--FVLDDSLEKQLRLDAIFNEIAKGKDND
1IPI Chain:A ((1-114))
MYRKGAQAERELIKLLEKHGFAVVRSAGSKKVDLVAGNGKKYLCIEVKVTKK--DHLYVGKRDMGRLIEFSRRFGGIPVLAVKFLNVGWRFIEVSPKIEKFVFTPS--SGVSLEVLLG---------
General information:
TITO was launched using:
RESULT:
Template:
1IPI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33904 for 606 contacts (-55.9/contact) +
2D Compatibility (PS) -11050 + (NN) -5271 + (LL) 544
1D Compatibility (HY) -6800 + (ID) 950
Total energy: -57431.0 ( -94.77 by residue)
QMean score : 0.397
(partial model without unconserved sides chains):
PDB file :
Tito_1IPI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IPI-query.scw
PDB file :
Tito_Scwrl_1IPI.pdb
: