Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILVIQGPNLNMLGHRDPRLYGMVTLDQIHEIMQTFVKQGNLDVELEFFQTNFEGEIIDKIQESVGSDYEGIIINPGAFSHTSIAIADAIMLAGKPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNILAEMKAFQEAQKNNPNNPNNPINNQK
4B6R Chain:C ((1-156))
MKILVIQGPNLNMLGHRDPRLYGMVTLDQIHEIMQTFVKQGNLDVELEFFQTNFEGEIIDKIQESVGSDYEGIIINPGAFSHTSIAIADAIMLAGKPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNILAEMKAFQEAQKN-------------
General information:
TITO was launched using:
RESULT:
Template:
4B6R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118656 for 1212 contacts (-97.9/contact) +
2D Compatibility (PS) -17528 + (NN) -6900 + (LL) -736
1D Compatibility (HY) -24400 + (ID) 7800
Total energy: -176020.0 ( -145.23 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_4B6R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B6R-query.scw
PDB file :
Tito_Scwrl_4B6R.pdb
: