Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNAFKAFALLIVFFSNALLAQDLKIAAAANLTRALKALVKEFQKEHPKDAINISFNSSGKLYAQIA-QNAPFDLFISADIARPKKLYDEKITPFKEEVYAKGVLVL-WSENL------KMDSLEILKDPKIKRIAMANPKLAPYGKASMEVLDRLKL-------TPSLKS---------------------------KIIYGASISQAHQFIATKNAQIGFGALSLIDKKDKNLSYFIIDKT--------------------------LYNPIEQALIITKNGANNPLAKVFKDFLFSPKARAIFKEYGYIVD |
| 3CFZ Chain:A ((4-292)) | --------------------KIVLKIFHAGSLSVPFEEYEKMFEKEHPNVDVEREPAGSVACVRKIIDLGKKADILASADYSLIPQMMMPKYAD-WYVMFARNEIVLAYTDKSKYKDEINSTNWYKILQRPDVKIGFSNPNDDPCGYRTQMVLQLAELYYKDPTIYDNLVLKHSNIKVEENNGTYLILVPKELDVDTNKLFVRSKETDLLAPLEAGAFDYLFIYKSVANQH--HLKYIELPKEINLGYYEYADTYKKVALKIIAKNKTINAKPIVYGMTVPTNAPHKKEAIEFVKFVLGH--PEVLENNGQPAI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CFZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100143 for 1880 contacts (-53.3/contact) +
2D Compatibility (PS) -23985 + (NN) -12583 + (LL) 2680
1D Compatibility (HY) -9600 + (ID) 2150
Total energy: -145781.0 ( -77.54 by residue)
QMean score : 0.507
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